Lab Members

Principal Investigator

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Matthew N. McCall

Associate Professor of Biostatistics and Biomedical Genetics

Statistical Genomics, Bioinformatics, Systems Biology

Graduate Students

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David S Burton

Statistics PhD Student

Statistical Genomics, Network Modeling, Network Visualization, Environmental Health

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Erik Vonkaenel

Statistics PhD Student

Microglia, Cell Imaging

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Zachary Brehm

Statistics PhD Student

Statistical Genomics, Cell Mixtures

Undergraduate Students

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Daniel Munoz Huerta

Undergraduate Student

Interactive Graphics, Network Modeling

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Yuewei Fei

Undergraduate Student

Bioinformatics, MicroRNA

Postdoctoral Alumni

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Isar Nassiri

Postdoctoral Researcher at University of Oxford

Bioinformatics, Systems Biology

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Qingyan Lilly Xie

Data Scientist at Paychex

Medical Genomics, Precision Medicine

Graduate Alumni

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Yun Zhang

Staff Scientist at JCVI

Statistical Genomics, Co-expression, Deconvolution

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Valeriia Sherina

Principal Statistician at GSK

Statistical Genomics, Non-detects in qPCR, Missing data

Undergraduate Alumni

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Jonavelle Cuerdo

Data Analyst at Origent Data Sciences

Co-expression, Deconvolution

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Benjamin Hsu

MS Student in Actuarial Science at Columbia University

Autoregressive models, Amplification dynamics in qPCR

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Winslow Powers

Bioinformatics Software Engineer at One Brave Idea

Bioinformatics, Cell Mixtures

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Lauren Kemperman

Machine Learning Software Engineer at Iterative Scopes

Interactive graphics, Data science

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Jeffrey Hrebenach

Software Development Engineer II at Amazon

Distributed systems, Serverless architecture

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Kailey Ferger

PhD Student in Computational Biology at UC Berkeley

Bioinformatics, MicroRNA

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Oleg Demus

Technology Development Trainee

Statistical Genomics, Cell Mixtures

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Qidi Yang

MS Student in Computational Biology at Carnegie Mellon University

Bioinformatics, MicroRNA

Projects

Cell Mixtures

The effects of tissue composition and cellular localization on genomic measurements.

Cell Morphology

Methods to quantify and analyze changes in cell morphology.

MicroRNA

Methods to analyze microRNA expression.

Network Modeling

Methods to model cellular networks.

qPCR data

Methods to model and analyze data from qPCR experiments.